Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 COX11P1-201ENST00000489116 835 ntBASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 AL592071.1-201ENST00000611956 408 ntBASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 AC004817.3-201ENST00000602957 2129 ntBASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 AC087481.3-201ENST00000602886 1894 ntBASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 AL020989.1-201ENST00000422979 469 ntBASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 VENTXP5-201ENST00000523979 775 ntBASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 AC011467.2-201ENST00000598425 242 ntBASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.1□□□□□ -0.15
SMIM4Q8WVI0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 LINC00982-205ENST00000420957 435 ntBASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 AC011840.4-201ENST00000578471 627 ntBASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 MPDU1-223ENST00000582151 728 ntBASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms