Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 AC090680.1-201ENST00000464696 860 ntBASIC10.12□□□□□ -0.79
SVIPQ8NHG7 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 ENPP2-203ENST00000427067 3271 ntTSL 5 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 LINC01845-201ENST00000518418 2012 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 AC007610.4-201ENST00000623307 2125 ntBASIC10.12□□□□□ -0.79
SVIPQ8NHG7 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.12□□□□□ -0.79
SVIPQ8NHG7 AC111182.1-201ENST00000588701 3419 ntBASIC10.11□□□□□ -0.79
SVIPQ8NHG7 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 COL25A1-202ENST00000399127 2500 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 LINC01287-201ENST00000416982 2624 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 PSG4-202ENST00000405312 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 AC010740.1-201ENST00000417035 684 ntBASIC10.11□□□□□ -0.79
SVIPQ8NHG7 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 MTND6P16-201ENST00000504006 520 ntBASIC10.11□□□□□ -0.79
SVIPQ8NHG7 TRMT112-205ENST00000539854 659 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 STXBP5-AS1-201ENST00000367477 2927 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 DDX11L2-201ENST00000437401 1398 ntBASIC10.11□□□□□ -0.79
SVIPQ8NHG7 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 LILRB1-204ENST00000396327 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SVIPQ8NHG7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms