RNA–Protein interactions for RNA: ENST00000507056.1

LINC01259-201, Transcript of long intergenic non-protein coding RNA 1259, humanhuman

TSL 3 BASIC

Gene LINC01259, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01259-201ENST00000507056 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
LINC01259-201ENST00000507056 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
LINC01259-201ENST00000507056 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
LINC01259-201ENST00000507056 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
LINC01259-201ENST00000507056 PLPPR3Q6T4P5 718 aa22.48■■□□□ 1.19
LINC01259-201ENST00000507056 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
LINC01259-201ENST00000507056 ABCC9O60706 1549 aa22.13■■□□□ 1.13
LINC01259-201ENST00000507056 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
LINC01259-201ENST00000507056 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
LINC01259-201ENST00000507056 ADRA2BP18089 450 aa20.95■□□□□ 0.94
LINC01259-201ENST00000507056 RB1CC1Q8TDY2 1594 aa20.91■□□□□ 0.94
LINC01259-201ENST00000507056 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
LINC01259-201ENST00000507056 KCNA4P22459 653 aa20.86■□□□□ 0.93
LINC01259-201ENST00000507056 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
LINC01259-201ENST00000507056 NACADO15069 1562 aa20.72■□□□□ 0.91
LINC01259-201ENST00000507056 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.89
LINC01259-201ENST00000507056 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
LINC01259-201ENST00000507056 FOXD1Q16676 465 aa20.45■□□□□ 0.86
LINC01259-201ENST00000507056 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
LINC01259-201ENST00000507056 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
LINC01259-201ENST00000507056 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
LINC01259-201ENST00000507056 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
LINC01259-201ENST00000507056 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
LINC01259-201ENST00000507056 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
LINC01259-201ENST00000507056 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
LINC01259-201ENST00000507056 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
LINC01259-201ENST00000507056 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
LINC01259-201ENST00000507056 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
LINC01259-201ENST00000507056 PPP4R3CPQ6ZMV5 832 aa19.95■□□□□ 0.78
LINC01259-201ENST00000507056 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
LINC01259-201ENST00000507056 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
LINC01259-201ENST00000507056 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
LINC01259-201ENST00000507056 PIAS4Q8N2W9 510 aaPredicted RBP19.56■□□□□ 0.72
LINC01259-201ENST00000507056 NPM3O75607 178 aaKnown RBP19.48■□□□□ 0.71
LINC01259-201ENST00000507056 DNAJC5Q9H3Z4 198 aa19.38■□□□□ 0.69
LINC01259-201ENST00000507056 ZBTB22O15209 634 aa19.21■□□□□ 0.67
LINC01259-201ENST00000507056 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
LINC01259-201ENST00000507056 CNKSR2Q8WXI2 1034 aa19.14■□□□□ 0.65
LINC01259-201ENST00000507056 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
LINC01259-201ENST00000507056 CUX2O14529 1486 aa19.09■□□□□ 0.65
LINC01259-201ENST00000507056 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
LINC01259-201ENST00000507056 SMARCA4P51532 1647 aa19■□□□□ 0.63
LINC01259-201ENST00000507056 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
LINC01259-201ENST00000507056 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
LINC01259-201ENST00000507056 NESP48681 1621 aa18.97■□□□□ 0.63
LINC01259-201ENST00000507056 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
LINC01259-201ENST00000507056 SLC24A1O60721 1099 aa18.88■□□□□ 0.61
LINC01259-201ENST00000507056 FOXD4L1Q9NU39 408 aa18.88■□□□□ 0.61
LINC01259-201ENST00000507056 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
LINC01259-201ENST00000507056 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
LINC01259-201ENST00000507056 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
LINC01259-201ENST00000507056 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
LINC01259-201ENST00000507056 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
LINC01259-201ENST00000507056 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
LINC01259-201ENST00000507056 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
LINC01259-201ENST00000507056 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
LINC01259-201ENST00000507056 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
LINC01259-201ENST00000507056 RTN4Q9NQC3 1192 aaKnown RBP18.65■□□□□ 0.58
LINC01259-201ENST00000507056 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
LINC01259-201ENST00000507056 WIZO95785 1651 aa18.53■□□□□ 0.56
LINC01259-201ENST00000507056 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
LINC01259-201ENST00000507056 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
LINC01259-201ENST00000507056 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
LINC01259-201ENST00000507056 WDR62O43379 1518 aa18.44■□□□□ 0.54
LINC01259-201ENST00000507056 MSH5O43196 834 aa18.41■□□□□ 0.54
LINC01259-201ENST00000507056 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
LINC01259-201ENST00000507056 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
LINC01259-201ENST00000507056 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
LINC01259-201ENST00000507056 CFTRP13569 1480 aa18.33■□□□□ 0.52
LINC01259-201ENST00000507056 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
LINC01259-201ENST00000507056 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
LINC01259-201ENST00000507056 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
LINC01259-201ENST00000507056 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
LINC01259-201ENST00000507056 ATXN8OSP0DMR3 200 aa18.17■□□□□ 0.5
LINC01259-201ENST00000507056 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
LINC01259-201ENST00000507056 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
LINC01259-201ENST00000507056 FKBP8Q14318 412 aa18.09■□□□□ 0.49
LINC01259-201ENST00000507056 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.48
LINC01259-201ENST00000507056 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
LINC01259-201ENST00000507056 PRDM2Q13029 1718 aa18.05■□□□□ 0.48
LINC01259-201ENST00000507056 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
LINC01259-201ENST00000507056 TOPBP1Q92547 1522 aa18■□□□□ 0.47
LINC01259-201ENST00000507056 MYCNP04198 464 aaPredicted RBP18■□□□□ 0.47
LINC01259-201ENST00000507056 RIMBP3CA6NJZ7 1639 aa17.99■□□□□ 0.47
LINC01259-201ENST00000507056 RIMBP3BA6NNM3 1639 aa17.99■□□□□ 0.47
LINC01259-201ENST00000507056 RIMBP3Q9UFD9 1639 aa17.99■□□□□ 0.47
LINC01259-201ENST00000507056 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
LINC01259-201ENST00000507056 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
LINC01259-201ENST00000507056 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
LINC01259-201ENST00000507056 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC01259-201ENST00000507056 EIF4G3O43432 1585 aaKnown RBP17.89■□□□□ 0.45
LINC01259-201ENST00000507056 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
LINC01259-201ENST00000507056 DNMBPQ6XZF7 1577 aa17.88■□□□□ 0.45
LINC01259-201ENST00000507056 FBLN2P98095 1184 aa17.84■□□□□ 0.45
LINC01259-201ENST00000507056 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.45
LINC01259-201ENST00000507056 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
LINC01259-201ENST00000507056 CHD1O14646 1710 aa17.81■□□□□ 0.44
LINC01259-201ENST00000507056 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
LINC01259-201ENST00000507056 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
LINC01259-201ENST00000507056 SOGA1O94964 1423 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms