RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 NISCHQ9Y2I1 1504 aa20.91■□□□□ 0.94
LINC01287-201ENST00000416982 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
LINC01287-201ENST00000416982 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
LINC01287-201ENST00000416982 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
LINC01287-201ENST00000416982 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
LINC01287-201ENST00000416982 HRCP23327 699 aa17.25■□□□□ 0.35
LINC01287-201ENST00000416982 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
LINC01287-201ENST00000416982 ABCC9O60706 1549 aa17.19■□□□□ 0.34
LINC01287-201ENST00000416982 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.32
LINC01287-201ENST00000416982 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
LINC01287-201ENST00000416982 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
LINC01287-201ENST00000416982 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
LINC01287-201ENST00000416982 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
LINC01287-201ENST00000416982 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
LINC01287-201ENST00000416982 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
LINC01287-201ENST00000416982 NACADO15069 1562 aa16.65■□□□□ 0.26
LINC01287-201ENST00000416982 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
LINC01287-201ENST00000416982 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
LINC01287-201ENST00000416982 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC01287-201ENST00000416982 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
LINC01287-201ENST00000416982 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
LINC01287-201ENST00000416982 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
LINC01287-201ENST00000416982 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
LINC01287-201ENST00000416982 TRIM26Q12899 539 aaPredicted RBP16.24■□□□□ 0.19
LINC01287-201ENST00000416982 MYT1Q01538 1121 aa16.21■□□□□ 0.19
LINC01287-201ENST00000416982 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
LINC01287-201ENST00000416982 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
LINC01287-201ENST00000416982 WIZO95785 1651 aa16.14■□□□□ 0.17
LINC01287-201ENST00000416982 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
LINC01287-201ENST00000416982 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
LINC01287-201ENST00000416982 BAZ1AQ9NRL2 1556 aaPredicted RBP16.05■□□□□ 0.16
LINC01287-201ENST00000416982 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
LINC01287-201ENST00000416982 FAM9AQ8IZU1 332 aaPredicted RBP15.99■□□□□ 0.15
LINC01287-201ENST00000416982 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
LINC01287-201ENST00000416982 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
LINC01287-201ENST00000416982 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
LINC01287-201ENST00000416982 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
LINC01287-201ENST00000416982 NEUROD1Q13562 356 aa15.83■□□□□ 0.13
LINC01287-201ENST00000416982 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
LINC01287-201ENST00000416982 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
LINC01287-201ENST00000416982 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
LINC01287-201ENST00000416982 GTF3C3Q9Y5Q9 886 aa15.73■□□□□ 0.11
LINC01287-201ENST00000416982 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
LINC01287-201ENST00000416982 BAZ1BQ9UIG0 1483 aaKnown RBP15.68■□□□□ 0.1
LINC01287-201ENST00000416982 CENPBP07199 599 aaPredicted RBP15.66■□□□□ 0.1
LINC01287-201ENST00000416982 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
LINC01287-201ENST00000416982 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
LINC01287-201ENST00000416982 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
LINC01287-201ENST00000416982 SOGA1O94964 1423 aa15.51■□□□□ 0.07
LINC01287-201ENST00000416982 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
LINC01287-201ENST00000416982 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.06
LINC01287-201ENST00000416982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.06
LINC01287-201ENST00000416982 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
LINC01287-201ENST00000416982 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
LINC01287-201ENST00000416982 CCER1Q8TC90 406 aaPredicted RBP15.43■□□□□ 0.06
LINC01287-201ENST00000416982 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
LINC01287-201ENST00000416982 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
LINC01287-201ENST00000416982 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
LINC01287-201ENST00000416982 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
LINC01287-201ENST00000416982 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
LINC01287-201ENST00000416982 SYNJ1O43426 1573 aa15.34■□□□□ 0.05
LINC01287-201ENST00000416982 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
LINC01287-201ENST00000416982 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
LINC01287-201ENST00000416982 CFTRP13569 1480 aa15.25■□□□□ 0.03
LINC01287-201ENST00000416982 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
LINC01287-201ENST00000416982 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
LINC01287-201ENST00000416982 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
LINC01287-201ENST00000416982 NESP48681 1621 aa15.18■□□□□ 0.02
LINC01287-201ENST00000416982 CUX1P39880 1505 aa15.17■□□□□ 0.02
LINC01287-201ENST00000416982 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
LINC01287-201ENST00000416982 EEA1Q15075 1411 aa15.15■□□□□ 0.02
LINC01287-201ENST00000416982 MIER1Q8N108 512 aa15.14■□□□□ 0.01
LINC01287-201ENST00000416982 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
LINC01287-201ENST00000416982 TNIKQ9UKE5 1360 aa15.12■□□□□ 0.01
LINC01287-201ENST00000416982 RAPGEF2Q9Y4G8 1499 aa15.1■□□□□ 0.01
LINC01287-201ENST00000416982 BCL11AQ9H165 835 aa15.09■□□□□ 0.01
LINC01287-201ENST00000416982 GOLGA3Q08378 1498 aa15.09■□□□□ 0.01
LINC01287-201ENST00000416982 CLSPNQ9HAW4 1339 aa15.07■□□□□ 0
LINC01287-201ENST00000416982 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
LINC01287-201ENST00000416982 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
LINC01287-201ENST00000416982 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
LINC01287-201ENST00000416982 BIVM-ERCC5R4GMW8 1640 aa15.02□□□□□ -0.01
LINC01287-201ENST00000416982 SUPT16HQ9Y5B9 1047 aaKnown RBP15□□□□□ -0.01
LINC01287-201ENST00000416982 KIF27Q86VH2 1401 aa15□□□□□ -0.01
LINC01287-201ENST00000416982 CUX2O14529 1486 aa14.99□□□□□ -0.01
LINC01287-201ENST00000416982 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
LINC01287-201ENST00000416982 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
LINC01287-201ENST00000416982 APLP2Q06481 763 aa14.98□□□□□ -0.01
LINC01287-201ENST00000416982 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
LINC01287-201ENST00000416982 CLIP1P30622 1438 aa14.98□□□□□ -0.01
LINC01287-201ENST00000416982 RAD54L2Q9Y4B4 1467 aa14.97□□□□□ -0.01
LINC01287-201ENST00000416982 IGF1RP08069 1367 aa14.95□□□□□ -0.02
LINC01287-201ENST00000416982 PRXQ9BXM0 1461 aa14.93□□□□□ -0.02
LINC01287-201ENST00000416982 KIF21BO75037 1637 aa14.93□□□□□ -0.02
LINC01287-201ENST00000416982 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
LINC01287-201ENST00000416982 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
LINC01287-201ENST00000416982 PRKCSHP14314 528 aaPredicted RBP14.88□□□□□ -0.03
LINC01287-201ENST00000416982 TDRD9Q8NDG6 1382 aaKnown RBP14.88□□□□□ -0.03
LINC01287-201ENST00000416982 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
LINC01287-201ENST00000416982 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms