Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC126177.1-201ENST00000547829 2218 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 NUS1P2-201ENST00000417358 873 ntBASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 PCED1CP-201ENST00000419887 785 ntBASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 NKAPP1-205ENST00000585790 367 ntBASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 AP001269.4-201ENST00000609611 512 ntBASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 IER3-202ENST00000376377 1350 ntBASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 AC006058.4-201ENST00000624016 1670 ntBASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01561Q8N1V8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 AC092384.3-202ENST00000564646 2873 ntBASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 U82695.1-201ENST00000635752 1889 ntBASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 AC132008.2-207ENST00000454517 770 ntBASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms