Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AC079776.1-201ENST00000401540 1152 ntBASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AC112492.5-201ENST00000421897 457 ntBASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 RPS2P32-201ENST00000439199 892 ntBASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 KRT17P8-201ENST00000540749 863 ntBASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AC124947.2-201ENST00000547118 1133 ntBASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AC092068.3-201ENST00000587894 2016 ntBASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 SLC7A15P-201ENST00000424028 1363 ntBASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 SERBP1P3-201ENST00000459980 809 ntBASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 RAB43P1-201ENST00000561790 589 ntBASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEFF1Q8IYR6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEFF1Q8IYR6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 SNX33P1-201ENST00000592116 1762 ntBASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 AC245100.3-201ENST00000441281 285 ntBASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 MIR6805-201ENST00000615055 62 ntBASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEFF1Q8IYR6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms