Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 AC016027.1-202ENST00000607927 1699 ntBASIC20.56■□□□□ 0.88
SKAP1Q86WV1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 CROCCP1-201ENST00000426910 5675 ntBASIC20.56■□□□□ 0.88
SKAP1Q86WV1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKAP1Q86WV1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 MIR3652-201ENST00000579335 131 ntBASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AC091167.2-201ENST00000579581 588 ntBASIC20.55■□□□□ 0.88
SKAP1Q86WV1 TP73-AS1-207ENST00000624167 988 ntBASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AC005622.1-201ENST00000636801 1703 ntBASIC20.55■□□□□ 0.88
SKAP1Q86WV1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 AP002414.3-201ENST00000589352 1468 ntBASIC20.55■□□□□ 0.88
SKAP1Q86WV1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKAP1Q86WV1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
SKAP1Q86WV1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 LINC01144-201ENST00000626198 1710 ntBASIC20.53■□□□□ 0.88
SKAP1Q86WV1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.53■□□□□ 0.88
SKAP1Q86WV1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.53■□□□□ 0.88
SKAP1Q86WV1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms