Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RBM17P3-201ENST00000417687 1192 ntBASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 AC104109.2-201ENST00000602919 1418 ntBASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 RPS2P1-201ENST00000434010 821 ntBASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 AC092910.1-201ENST00000482027 1129 ntBASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 AC113404.2-201ENST00000507884 177 ntBASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 AC009533.2-201ENST00000543664 586 ntBASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXR1Q6PIV2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 AL391256.1-201ENST00000443260 1855 ntBASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 MTCL1P1-201ENST00000446207 792 ntBASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 AC116407.2-201ENST00000613639 860 ntBASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 AC079416.2-201ENST00000625035 1193 ntBASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXR1Q6PIV2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms