Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 ESRRAP1-201ENST00000400596 1257 ntBASIC12.49□□□□□ -0.41
MRPL54Q6P161 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 AC007663.1-201ENST00000438948 1240 ntBASIC12.49□□□□□ -0.41
MRPL54Q6P161 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 REXO1L10P-201ENST00000615707 1290 ntBASIC12.49□□□□□ -0.41
MRPL54Q6P161 REXO1L12P-201ENST00000622156 912 ntBASIC12.49□□□□□ -0.41
MRPL54Q6P161 AC116562.4-202ENST00000641738 218 ntBASIC12.49□□□□□ -0.41
MRPL54Q6P161 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 REXO1L8P-201ENST00000604378 1897 ntBASIC12.48□□□□□ -0.41
MRPL54Q6P161 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.48□□□□□ -0.41
MRPL54Q6P161 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL54Q6P161 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL54Q6P161 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms