Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH17Q12864 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH17Q12864 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH17Q12864 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH17Q12864 IL9RP2-201ENST00000423948 1312 ntBASIC16.65■□□□□ 0.26
CDH17Q12864 BCAR1-209ENST00000546196 1340 ntBASIC16.65■□□□□ 0.26
CDH17Q12864 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH17Q12864 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH17Q12864 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH17Q12864 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDH17Q12864 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH17Q12864 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH17Q12864 U82695.1-201ENST00000635752 1889 ntBASIC16.65■□□□□ 0.26
CDH17Q12864 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH17Q12864 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH17Q12864 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH17Q12864 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CDH17Q12864 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH17Q12864 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH17Q12864 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH17Q12864 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH17Q12864 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH17Q12864 AC004877.2-201ENST00000623941 599 ntBASIC16.64■□□□□ 0.25
CDH17Q12864 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH17Q12864 AL592424.1-201ENST00000563624 1536 ntBASIC16.64■□□□□ 0.25
CDH17Q12864 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDH17Q12864 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH17Q12864 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH17Q12864 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH17Q12864 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH17Q12864 AC008741.2-201ENST00000612792 3115 ntBASIC16.63■□□□□ 0.25
CDH17Q12864 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 FER1L4-210ENST00000615531 5998 ntBASIC16.63■□□□□ 0.25
CDH17Q12864 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 AC025580.3-201ENST00000617932 1424 ntBASIC16.63■□□□□ 0.25
CDH17Q12864 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CDH17Q12864 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 AC140658.5-201ENST00000438532 169 ntBASIC16.63■□□□□ 0.25
CDH17Q12864 FDX1P1-201ENST00000449115 551 ntBASIC16.63■□□□□ 0.25
CDH17Q12864 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.63■□□□□ 0.25
CDH17Q12864 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH17Q12864 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH17Q12864 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
CDH17Q12864 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 AL365203.3-201ENST00000609742 2057 ntBASIC16.63■□□□□ 0.25
CDH17Q12864 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH17Q12864 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH17Q12864 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH17Q12864 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms