Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDH1Q08174 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH1Q08174 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDH1Q08174 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH1Q08174 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 ZNF259P1-201ENST00000407656 1365 ntBASIC15.9■□□□□ 0.14
PCDH1Q08174 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH1Q08174 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 AL590627.1-203ENST00000421194 1026 ntBASIC15.9■□□□□ 0.14
PCDH1Q08174 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDH1Q08174 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH1Q08174 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.9■□□□□ 0.14
PCDH1Q08174 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH1Q08174 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH1Q08174 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDH1Q08174 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDH1Q08174 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH1Q08174 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
PCDH1Q08174 REXO1L8P-201ENST00000604378 1897 ntBASIC15.9■□□□□ 0.14
PCDH1Q08174 PKD1P5-201ENST00000532415 10291 ntBASIC15.9■□□□□ 0.14
PCDH1Q08174 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 AC092919.2-201ENST00000623631 1645 ntBASIC15.9■□□□□ 0.14
PCDH1Q08174 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH1Q08174 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH1Q08174 AC092364.2-201ENST00000596710 2692 ntBASIC15.9■□□□□ 0.14
PCDH1Q08174 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH1Q08174 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDH1Q08174 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 AC005622.1-201ENST00000636801 1703 ntBASIC15.89■□□□□ 0.13
PCDH1Q08174 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH1Q08174 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH1Q08174 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PCDH1Q08174 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.89■□□□□ 0.13
PCDH1Q08174 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH1Q08174 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDH1Q08174 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDH1Q08174 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PCDH1Q08174 FAM197Y3-203ENST00000618346 717 ntBASIC15.89■□□□□ 0.13
PCDH1Q08174 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDH1Q08174 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH1Q08174 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH1Q08174 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH1Q08174 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH1Q08174 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH1Q08174 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH1Q08174 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH1Q08174 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 AC093724.1-201ENST00000448659 1027 ntBASIC15.88■□□□□ 0.13
PCDH1Q08174 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 PDPK2P-202ENST00000562415 1191 ntBASIC15.88■□□□□ 0.13
PCDH1Q08174 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms