Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX1P83916 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 AGAP7P-201ENST00000582299 2062 ntBASIC17.25■□□□□ 0.35
CBX1P83916 AGAP14-201ENST00000624701 2060 ntBASIC17.25■□□□□ 0.35
CBX1P83916 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 FGD5P1-202ENST00000614866 2498 ntBASIC17.25■□□□□ 0.35
CBX1P83916 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 NBPF21P-201ENST00000425093 1451 ntBASIC17.24■□□□□ 0.35
CBX1P83916 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CBX1P83916 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.24■□□□□ 0.35
CBX1P83916 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CBX1P83916 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CBX1P83916 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.24■□□□□ 0.35
CBX1P83916 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.24■□□□□ 0.35
CBX1P83916 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX1P83916 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX1P83916 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CBX1P83916 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CBX1P83916 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX1P83916 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX1P83916 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CBX1P83916 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX1P83916 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX1P83916 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX1P83916 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CBX1P83916 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.23■□□□□ 0.35
CBX1P83916 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.23■□□□□ 0.35
CBX1P83916 AC060766.5-201ENST00000590539 871 ntBASIC17.23■□□□□ 0.35
CBX1P83916 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.23■□□□□ 0.35
CBX1P83916 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX1P83916 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX1P83916 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX1P83916 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CBX1P83916 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX1P83916 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX1P83916 AC140479.7-201ENST00000636301 2332 ntBASIC17.22■□□□□ 0.35
CBX1P83916 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms