Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TMEM258P61165 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC9.68□□□□□ -0.86
TMEM258P61165 RPS2-202ENST00000526522 924 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 PCDHB17P-202ENST00000623466 3066 ntBASIC9.68□□□□□ -0.86
TMEM258P61165 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC9.68□□□□□ -0.86
TMEM258P61165 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM258P61165 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
TMEM258P61165 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
TMEM258P61165 LSS-211ENST00000522411 2523 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 ZEB1-AS1-208ENST00000607166 2503 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 AC016027.1-202ENST00000607927 1699 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 RCC2P6-201ENST00000526625 1557 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
TMEM258P61165 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 AC004854.2-201ENST00000608450 1441 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 PES1-204ENST00000402284 2144 ntTSL 5 BASIC9.67□□□□□ -0.86
TMEM258P61165 AC114271.1-201ENST00000612689 2813 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 HLA-G-202ENST00000376815 851 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 HERC2P10-201ENST00000570209 2393 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TMEM258P61165 AC008677.1-201ENST00000519230 1561 ntBASIC9.67□□□□□ -0.86
TMEM258P61165 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC9.67□□□□□ -0.86
TMEM258P61165 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM258P61165 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC9.66□□□□□ -0.86
TMEM258P61165 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM258P61165 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC9.66□□□□□ -0.86
TMEM258P61165 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM258P61165 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM258P61165 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM258P61165 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM258P61165 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms