Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP54P61011 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP54P61011 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.25■□□□□ 0.19
SRP54P61011 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.25■□□□□ 0.19
SRP54P61011 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP54P61011 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.25■□□□□ 0.19
SRP54P61011 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.25■□□□□ 0.19
SRP54P61011 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP54P61011 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.25■□□□□ 0.19
SRP54P61011 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.25■□□□□ 0.19
SRP54P61011 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.25■□□□□ 0.19
SRP54P61011 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP54P61011 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.25■□□□□ 0.19
SRP54P61011 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP54P61011 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.25■□□□□ 0.19
SRP54P61011 AC018529.1-201ENST00000613063 361 ntBASIC16.25■□□□□ 0.19
SRP54P61011 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRP54P61011 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SRP54P61011 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP54P61011 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SRP54P61011 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 FO538757.1-201ENST00000623083 1397 ntBASIC16.25■□□□□ 0.19
SRP54P61011 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP54P61011 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SRP54P61011 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.24■□□□□ 0.19
SRP54P61011 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SRP54P61011 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.24■□□□□ 0.19
SRP54P61011 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.24■□□□□ 0.19
SRP54P61011 TREML5P-201ENST00000421694 576 ntBASIC16.24■□□□□ 0.19
SRP54P61011 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 BASP1P1-201ENST00000430708 665 ntBASIC16.24■□□□□ 0.19
SRP54P61011 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.24■□□□□ 0.19
SRP54P61011 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.24■□□□□ 0.19
SRP54P61011 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.24■□□□□ 0.19
SRP54P61011 SPTSSB-204ENST00000617024 1292 ntBASIC16.24■□□□□ 0.19
SRP54P61011 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.24■□□□□ 0.19
SRP54P61011 AL512652.2-201ENST00000625156 1716 ntBASIC16.24■□□□□ 0.19
SRP54P61011 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SRP54P61011 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.24■□□□□ 0.19
SRP54P61011 FOXO1B-201ENST00000504678 1527 ntBASIC16.24■□□□□ 0.19
SRP54P61011 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.24■□□□□ 0.19
SRP54P61011 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SRP54P61011 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.24■□□□□ 0.19
SRP54P61011 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP54P61011 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SRP54P61011 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.23■□□□□ 0.19
SRP54P61011 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.23■□□□□ 0.19
SRP54P61011 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SRP54P61011 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.23■□□□□ 0.19
SRP54P61011 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SRP54P61011 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.23■□□□□ 0.19
SRP54P61011 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.23■□□□□ 0.19
SRP54P61011 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRP54P61011 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms