Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TEX28P2-201ENST00000617764 1221 ntBASIC16.21■□□□□ 0.19
CLDN2P57739 AF228730.6-201ENST00000641497 218 ntBASIC16.21■□□□□ 0.19
CLDN2P57739 AC084121.3-201ENST00000641716 218 ntBASIC16.21■□□□□ 0.19
CLDN2P57739 AC105233.6-201ENST00000642093 218 ntBASIC16.21■□□□□ 0.19
CLDN2P57739 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
CLDN2P57739 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN2P57739 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN2P57739 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN2P57739 AC022144.1-201ENST00000602255 1580 ntBASIC16.21■□□□□ 0.18
CLDN2P57739 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN2P57739 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CLDN2P57739 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN2P57739 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CLDN2P57739 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN2P57739 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 AL589702.1-201ENST00000641229 1509 ntBASIC16.2■□□□□ 0.18
CLDN2P57739 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLDN2P57739 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN2P57739 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN2P57739 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN2P57739 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLDN2P57739 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLDN2P57739 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.2■□□□□ 0.18
CLDN2P57739 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN2P57739 AL133215.2-201ENST00000609242 977 ntBASIC16.2■□□□□ 0.18
CLDN2P57739 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN2P57739 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN2P57739 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN2P57739 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CLDN2P57739 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLDN2P57739 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN2P57739 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 AC020916.1-201ENST00000587762 1774 ntBASIC16.19■□□□□ 0.18
CLDN2P57739 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN2P57739 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLDN2P57739 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLDN2P57739 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN2P57739 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN2P57739 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN2P57739 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CLDN2P57739 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLDN2P57739 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN2P57739 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLDN2P57739 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLDN2P57739 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 AC009053.2-201ENST00000563701 2365 ntBASIC16.18■□□□□ 0.18
CLDN2P57739 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN2P57739 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN2P57739 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.18■□□□□ 0.18
CLDN2P57739 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN2P57739 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.18■□□□□ 0.18
CLDN2P57739 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN2P57739 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.18■□□□□ 0.18
CLDN2P57739 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN2P57739 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN2P57739 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN2P57739 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN2P57739 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms