Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH13P55290 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.16■□□□□ 0.18
CDH13P55290 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH13P55290 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH13P55290 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDH13P55290 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDH13P55290 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH13P55290 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH13P55290 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDH13P55290 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 HCG4-201ENST00000418983 998 ntBASIC16.15■□□□□ 0.18
CDH13P55290 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH13P55290 POU5F1P6-201ENST00000466990 990 ntBASIC16.15■□□□□ 0.18
CDH13P55290 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH13P55290 AC105339.3-201ENST00000560043 636 ntBASIC16.15■□□□□ 0.18
CDH13P55290 OR7E47P-204ENST00000575924 449 ntBASIC16.15■□□□□ 0.18
CDH13P55290 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 PRAL-201ENST00000624952 3286 ntBASIC16.15■□□□□ 0.18
CDH13P55290 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH13P55290 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDH13P55290 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH13P55290 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CDH13P55290 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH13P55290 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDH13P55290 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDH13P55290 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.14■□□□□ 0.18
CDH13P55290 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH13P55290 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDH13P55290 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH13P55290 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH13P55290 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH13P55290 AC018712.1-201ENST00000455767 687 ntBASIC16.14■□□□□ 0.17
CDH13P55290 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH13P55290 AC004790.2-201ENST00000623588 572 ntBASIC16.14■□□□□ 0.17
CDH13P55290 AC148477.8-201ENST00000624298 468 ntBASIC16.14■□□□□ 0.17
CDH13P55290 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDH13P55290 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH13P55290 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH13P55290 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH13P55290 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDH13P55290 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDH13P55290 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH13P55290 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDH13P55290 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH13P55290 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH13P55290 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH13P55290 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH13P55290 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CDH13P55290 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH13P55290 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH13P55290 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH13P55290 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms