Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN4P51793 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCN4P51793 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CLCN4P51793 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCN4P51793 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN4P51793 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLCN4P51793 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLCN4P51793 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN4P51793 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCN4P51793 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
CLCN4P51793 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.22■□□□□ 0.35
CLCN4P51793 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.22■□□□□ 0.35
CLCN4P51793 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCN4P51793 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN4P51793 AC132938.2-201ENST00000579188 680 ntBASIC17.22■□□□□ 0.35
CLCN4P51793 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN4P51793 AC026979.3-201ENST00000607315 403 ntBASIC17.22■□□□□ 0.35
CLCN4P51793 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.22■□□□□ 0.35
CLCN4P51793 AL591163.1-201ENST00000641757 987 ntBASIC17.22■□□□□ 0.35
CLCN4P51793 SLC7A15P-201ENST00000424028 1363 ntBASIC17.22■□□□□ 0.35
CLCN4P51793 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN4P51793 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN4P51793 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCN4P51793 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCN4P51793 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCN4P51793 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLCN4P51793 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLCN4P51793 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CLCN4P51793 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 AC011495.1-201ENST00000498085 584 ntBASIC17.21■□□□□ 0.35
CLCN4P51793 AP002490.2-201ENST00000524791 560 ntBASIC17.21■□□□□ 0.35
CLCN4P51793 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCN4P51793 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 SRD5A3P1-201ENST00000603021 949 ntBASIC17.21■□□□□ 0.35
CLCN4P51793 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLCN4P51793 AC007431.3-201ENST00000623221 587 ntBASIC17.21■□□□□ 0.35
CLCN4P51793 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCN4P51793 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN4P51793 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN4P51793 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLCN4P51793 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 AL645728.1-201ENST00000366221 2101 ntBASIC17.2■□□□□ 0.34
CLCN4P51793 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLCN4P51793 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLCN4P51793 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCN4P51793 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN4P51793 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN4P51793 SDHAP3-202ENST00000515467 728 ntBASIC17.2■□□□□ 0.34
CLCN4P51793 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN4P51793 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 AC055876.2-201ENST00000531834 546 ntBASIC17.2■□□□□ 0.34
CLCN4P51793 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.2■□□□□ 0.34
CLCN4P51793 AL162274.1-201ENST00000617191 1098 ntBASIC17.2■□□□□ 0.34
CLCN4P51793 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms