Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC6A12P48065 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A12P48065 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC6A12P48065 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC6A12P48065 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 AL589702.1-201ENST00000641229 1509 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 MIR940-201ENST00000401276 94 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 AL355306.1-201ENST00000415580 579 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 ADH5P3-201ENST00000433842 1137 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 AC073389.1-201ENST00000595595 795 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A12P48065 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.85■□□□□ 0.13
SLC6A12P48065 AC092902.6-201ENST00000641783 218 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A12P48065 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A12P48065 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A12P48065 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
SLC6A12P48065 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC6A12P48065 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC6A12P48065 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 CDC14C-201ENST00000428251 1719 ntBASIC15.85■□□□□ 0.13
SLC6A12P48065 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC6A12P48065 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A12P48065 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A12P48065 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC6A12P48065 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 AC007950.2-201ENST00000615045 2347 ntBASIC15.84■□□□□ 0.13
SLC6A12P48065 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SLC6A12P48065 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC6A12P48065 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC6A12P48065 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.84■□□□□ 0.13
SLC6A12P48065 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC6A12P48065 POLD2P1-201ENST00000511220 997 ntBASIC15.84■□□□□ 0.13
SLC6A12P48065 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC6A12P48065 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC6A12P48065 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC6A12P48065 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC6A12P48065 AC069224.1-201ENST00000566372 1715 ntBASIC15.84■□□□□ 0.13
SLC6A12P48065 AKAP8P1-201ENST00000434743 1349 ntBASIC15.84■□□□□ 0.13
SLC6A12P48065 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A12P48065 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A12P48065 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.83■□□□□ 0.13
SLC6A12P48065 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
SLC6A12P48065 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A12P48065 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC6A12P48065 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A12P48065 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A12P48065 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
SLC6A12P48065 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.83■□□□□ 0.13
SLC6A12P48065 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A12P48065 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC6A12P48065 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A12P48065 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC6A12P48065 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms