Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
COL8A2P25067 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COL8A2P25067 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
COL8A2P25067 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 AC092171.3-201ENST00000610122 2651 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.92□□□□□ -0.18
COL8A2P25067 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL8A2P25067 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
COL8A2P25067 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
COL8A2P25067 AP3S2-216ENST00000617003 1561 ntBASIC13.92□□□□□ -0.18
COL8A2P25067 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.91□□□□□ -0.18
COL8A2P25067 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.91□□□□□ -0.18
COL8A2P25067 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 AL603756.1-201ENST00000606511 2163 ntBASIC13.91□□□□□ -0.18
COL8A2P25067 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.91□□□□□ -0.18
COL8A2P25067 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.91□□□□□ -0.18
COL8A2P25067 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 AC051619.7-201ENST00000568314 623 ntBASIC13.91□□□□□ -0.18
COL8A2P25067 MIR4453-201ENST00000584019 89 ntBASIC13.91□□□□□ -0.18
COL8A2P25067 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 MIR6080-201ENST00000617359 66 ntBASIC13.91□□□□□ -0.18
COL8A2P25067 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.91□□□□□ -0.18
COL8A2P25067 AC046158.3-201ENST00000624947 2558 ntBASIC13.91□□□□□ -0.18
COL8A2P25067 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.91□□□□□ -0.18
COL8A2P25067 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
COL8A2P25067 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 AC073439.1-201ENST00000624121 1774 ntBASIC13.91□□□□□ -0.18
COL8A2P25067 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL8A2P25067 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
COL8A2P25067 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.9□□□□□ -0.18
COL8A2P25067 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.9□□□□□ -0.18
COL8A2P25067 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.9□□□□□ -0.18
COL8A2P25067 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 MIR943-201ENST00000401286 94 ntBASIC13.9□□□□□ -0.18
COL8A2P25067 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.9□□□□□ -0.18
COL8A2P25067 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.9□□□□□ -0.18
COL8A2P25067 KLF2P3-201ENST00000451977 1087 ntBASIC13.9□□□□□ -0.18
COL8A2P25067 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.9□□□□□ -0.18
COL8A2P25067 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COL8A2P25067 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.9□□□□□ -0.18
COL8A2P25067 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.9□□□□□ -0.18
COL8A2P25067 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.9□□□□□ -0.18
COL8A2P25067 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.9□□□□□ -0.18
COL8A2P25067 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.9□□□□□ -0.18
COL8A2P25067 AC011467.4-201ENST00000594891 528 ntBASIC13.9□□□□□ -0.18
COL8A2P25067 AL390955.2-201ENST00000603032 514 ntBASIC13.9□□□□□ -0.18
COL8A2P25067 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.9□□□□□ -0.18
COL8A2P25067 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
COL8A2P25067 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.9□□□□□ -0.18
COL8A2P25067 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.9□□□□□ -0.18
COL8A2P25067 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL8A2P25067 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms