Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRAFP15056 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRAFP15056 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BRAFP15056 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
BRAFP15056 LINC00895-201ENST00000629028 1637 ntBASIC17.02■□□□□ 0.31
BRAFP15056 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.02■□□□□ 0.31
BRAFP15056 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BRAFP15056 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRAFP15056 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
BRAFP15056 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BRAFP15056 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRAFP15056 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRAFP15056 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRAFP15056 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.01■□□□□ 0.31
BRAFP15056 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.01■□□□□ 0.31
BRAFP15056 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.01■□□□□ 0.31
BRAFP15056 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.01■□□□□ 0.31
BRAFP15056 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.01■□□□□ 0.31
BRAFP15056 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.01■□□□□ 0.31
BRAFP15056 KRT18P27-201ENST00000427733 1299 ntBASIC17.01■□□□□ 0.31
BRAFP15056 AL603832.2-201ENST00000566195 2125 ntBASIC17.01■□□□□ 0.31
BRAFP15056 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.01■□□□□ 0.31
BRAFP15056 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.01■□□□□ 0.31
BRAFP15056 AL589182.2-201ENST00000619332 1049 ntBASIC17.01■□□□□ 0.31
BRAFP15056 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.01■□□□□ 0.31
BRAFP15056 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 AC010491.1-201ENST00000563101 2797 ntBASIC17.01■□□□□ 0.31
BRAFP15056 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BRAFP15056 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRAFP15056 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BRAFP15056 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
BRAFP15056 AP002414.3-201ENST00000589352 1468 ntBASIC17■□□□□ 0.31
BRAFP15056 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17■□□□□ 0.31
BRAFP15056 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17■□□□□ 0.31
BRAFP15056 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17■□□□□ 0.31
BRAFP15056 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17■□□□□ 0.31
BRAFP15056 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17■□□□□ 0.31
BRAFP15056 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17■□□□□ 0.31
BRAFP15056 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17■□□□□ 0.31
BRAFP15056 IGHV3-22-201ENST00000520721 359 ntBASIC17■□□□□ 0.31
BRAFP15056 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17■□□□□ 0.31
BRAFP15056 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17■□□□□ 0.31
BRAFP15056 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17■□□□□ 0.31
BRAFP15056 AC105339.3-201ENST00000560043 636 ntBASIC17■□□□□ 0.31
BRAFP15056 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17■□□□□ 0.31
BRAFP15056 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BRAFP15056 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17■□□□□ 0.31
BRAFP15056 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BRAFP15056 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17■□□□□ 0.31
BRAFP15056 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BRAFP15056 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17■□□□□ 0.31
BRAFP15056 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17■□□□□ 0.31
BRAFP15056 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BRAFP15056 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRAFP15056 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.99■□□□□ 0.31
BRAFP15056 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAFP15056 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAFP15056 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.99■□□□□ 0.31
BRAFP15056 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.99■□□□□ 0.31
BRAFP15056 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.99■□□□□ 0.31
BRAFP15056 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRAFP15056 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAFP15056 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAFP15056 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAFP15056 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.99■□□□□ 0.31
BRAFP15056 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.99■□□□□ 0.31
BRAFP15056 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRAFP15056 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms