Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.88□□□□□ -0.35
CD28P10747 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.88□□□□□ -0.35
CD28P10747 AC027369.6-201ENST00000525520 931 ntBASIC12.88□□□□□ -0.35
CD28P10747 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.88□□□□□ -0.35
CD28P10747 AC190387.1-201ENST00000551683 408 ntBASIC12.88□□□□□ -0.35
CD28P10747 LINC02560-201ENST00000596379 459 ntBASIC12.88□□□□□ -0.35
CD28P10747 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.88□□□□□ -0.35
CD28P10747 AC239800.4-201ENST00000603712 296 ntBASIC12.88□□□□□ -0.35
CD28P10747 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 AC006277.1-201ENST00000624348 1610 ntBASIC12.88□□□□□ -0.35
CD28P10747 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
CD28P10747 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.87□□□□□ -0.35
CD28P10747 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.87□□□□□ -0.35
CD28P10747 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 AC126755.1-201ENST00000525846 6405 ntBASIC12.87□□□□□ -0.35
CD28P10747 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CD28P10747 PP12613-201ENST00000424958 2230 ntBASIC12.87□□□□□ -0.35
CD28P10747 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.87□□□□□ -0.35
CD28P10747 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.87□□□□□ -0.35
CD28P10747 AC241585.1-201ENST00000433527 519 ntBASIC12.87□□□□□ -0.35
CD28P10747 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.87□□□□□ -0.35
CD28P10747 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.87□□□□□ -0.35
CD28P10747 AC073389.1-201ENST00000595595 795 ntBASIC12.87□□□□□ -0.35
CD28P10747 AC073592.8-201ENST00000624126 511 ntBASIC12.87□□□□□ -0.35
CD28P10747 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CD28P10747 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD28P10747 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD28P10747 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD28P10747 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CD28P10747 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CD28P10747 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 AC015922.1-201ENST00000421102 1152 ntBASIC12.86□□□□□ -0.35
CD28P10747 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.86□□□□□ -0.35
CD28P10747 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD28P10747 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.86□□□□□ -0.35
CD28P10747 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.86□□□□□ -0.35
CD28P10747 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms