Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL3P10147 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL3P10147 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL3P10147 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL3P10147 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL3P10147 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCL3P10147 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL3P10147 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 AL353705.2-201ENST00000428243 662 ntBASIC14.94□□□□□ -0.02
CCL3P10147 AC055876.3-201ENST00000431496 288 ntBASIC14.94□□□□□ -0.02
CCL3P10147 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 AC093214.1-201ENST00000511688 1107 ntBASIC14.94□□□□□ -0.02
CCL3P10147 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 IGHV3-42-201ENST00000520410 361 ntBASIC14.94□□□□□ -0.02
CCL3P10147 AC069120.2-201ENST00000524091 540 ntBASIC14.94□□□□□ -0.02
CCL3P10147 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCL3P10147 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL3P10147 AC138649.4-201ENST00000612222 287 ntBASIC14.94□□□□□ -0.02
CCL3P10147 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL3P10147 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL3P10147 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL3P10147 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL3P10147 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL3P10147 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.93□□□□□ -0.02
CCL3P10147 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL3P10147 AC011467.4-201ENST00000594891 528 ntBASIC14.93□□□□□ -0.02
CCL3P10147 AC079328.2-201ENST00000561241 3354 ntBASIC14.93□□□□□ -0.02
CCL3P10147 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCL3P10147 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL3P10147 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL3P10147 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCL3P10147 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCL3P10147 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL3P10147 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CCL3P10147 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCL3P10147 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL3P10147 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL3P10147 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCL3P10147 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CCL3P10147 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL3P10147 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CCL3P10147 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL3P10147 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms