Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 SNX29P1-201ENST00000548357 1007 ntBASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 AP005482.1-201ENST00000563722 1273 ntBASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 AL033527.5-201ENST00000641382 801 ntBASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 AL139011.1-202ENST00000642063 584 ntBASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 GPAA1P2-202ENST00000606848 1787 ntBASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSB-PGBD3P0DP91 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CSB-PGBD3P0DP91 CLK3P2-201ENST00000427566 1453 ntBASIC21.64■■□□□ 1.06
CSB-PGBD3P0DP91 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSB-PGBD3P0DP91 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CSB-PGBD3P0DP91 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSB-PGBD3P0DP91 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
CSB-PGBD3P0DP91 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CSB-PGBD3P0DP91 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 CROCCP4-201ENST00000457096 498 ntBASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 AC008735.3-201ENST00000596646 500 ntBASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 NEFHP1-201ENST00000412845 2629 ntBASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 REXO1L6P-201ENST00000603433 1515 ntBASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CSB-PGBD3P0DP91 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 AC104596.2-201ENST00000512793 793 ntBASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 AC074044.1-201ENST00000609673 707 ntBASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.63■■□□□ 1.05
CSB-PGBD3P0DP91 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 AC092337.1-201ENST00000568699 1129 ntBASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 TMEM261P1-201ENST00000604899 340 ntBASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 MIR8072-201ENST00000614241 80 ntBASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms