Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MMP2P08253 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MMP2P08253 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 AC018695.7-201ENST00000624587 2492 ntBASIC16.53■□□□□ 0.24
MMP2P08253 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 AL592309.1-201ENST00000443127 649 ntBASIC16.53■□□□□ 0.24
MMP2P08253 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP2P08253 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
MMP2P08253 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP2P08253 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
MMP2P08253 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP2P08253 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MMP2P08253 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP2P08253 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 AL513523.2-202ENST00000427283 2040 ntBASIC16.52■□□□□ 0.24
MMP2P08253 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP2P08253 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP2P08253 KRT18P13-201ENST00000400056 1290 ntBASIC16.52■□□□□ 0.24
MMP2P08253 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP2P08253 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.52■□□□□ 0.24
MMP2P08253 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP2P08253 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP2P08253 KRT8P23-201ENST00000560090 1207 ntBASIC16.52■□□□□ 0.24
MMP2P08253 SPTSSB-204ENST00000617024 1292 ntBASIC16.52■□□□□ 0.24
MMP2P08253 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP2P08253 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP2P08253 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP2P08253 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP2P08253 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.52■□□□□ 0.23
MMP2P08253 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.52■□□□□ 0.23
MMP2P08253 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MMP2P08253 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MMP2P08253 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP2P08253 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MMP2P08253 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.52■□□□□ 0.23
MMP2P08253 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.52■□□□□ 0.23
MMP2P08253 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP2P08253 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.52■□□□□ 0.23
MMP2P08253 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.51■□□□□ 0.23
MMP2P08253 AC211486.1-202ENST00000416371 468 ntBASIC16.51■□□□□ 0.23
MMP2P08253 FAM58DP-201ENST00000428076 619 ntBASIC16.51■□□□□ 0.23
MMP2P08253 AC098859.1-201ENST00000502915 1238 ntBASIC16.51■□□□□ 0.23
MMP2P08253 AC211476.1-201ENST00000503899 468 ntBASIC16.51■□□□□ 0.23
MMP2P08253 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms