Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 PMS2P4-201ENST00000412466 1052 ntBASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC093724.1-201ENST00000448659 1027 ntBASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC073648.2-201ENST00000510116 352 ntBASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 DBET-201ENST00000630918 3363 ntBASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC023824.1-201ENST00000562945 2975 ntBASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC006058.4-201ENST00000624016 1670 ntBASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 IFNL4P1-201ENST00000607083 540 ntBASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV5-3A0A0A0MS03 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 CXCL1P1-201ENST00000502804 216 ntBASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms