Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTCH2Q9Y6C5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.39■□□□□ 0.54
PTCH2Q9Y6C5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PTCH2Q9Y6C5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCH2Q9Y6C5 AC068880.1-201ENST00000507289 2297 ntBASIC18.39■□□□□ 0.54
PTCH2Q9Y6C5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 AL139010.1-201ENST00000454878 894 ntBASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 AL021578.1-201ENST00000613646 709 ntBASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PTCH2Q9Y6C5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 SLC25A24P2-201ENST00000415059 510 ntBASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AL442647.2-201ENST00000429864 857 ntBASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 YBX1P6-201ENST00000442962 1002 ntBASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 IGHJ2P-201ENST00000454480 60 ntBASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 KRT8P13-201ENST00000463294 1010 ntBASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AP000812.2-201ENST00000538934 718 ntBASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 AL138688.1-201ENST00000624851 1594 ntBASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCH2Q9Y6C5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms