Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AC005622.1-201ENST00000636801 1703 ntBASIC17.1■□□□□ 0.33
YIPF1Q9Y548 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AC104794.3-201ENST00000566840 1248 ntBASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AL132655.2-201ENST00000596276 594 ntBASIC17.1■□□□□ 0.33
YIPF1Q9Y548 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AC063926.2-201ENST00000623766 1308 ntBASIC17.1■□□□□ 0.33
YIPF1Q9Y548 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YIPF1Q9Y548 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 SPDYE17-201ENST00000412399 783 ntBASIC17.09■□□□□ 0.33
YIPF1Q9Y548 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 GAPDHP21-201ENST00000450301 1010 ntBASIC17.09■□□□□ 0.33
YIPF1Q9Y548 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 AC044860.1-202ENST00000559481 777 ntBASIC17.09■□□□□ 0.33
YIPF1Q9Y548 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 KRT8P12-202ENST00000472924 1397 ntBASIC17.09■□□□□ 0.33
YIPF1Q9Y548 BTBD7P1-201ENST00000447253 1453 ntBASIC17.09■□□□□ 0.33
YIPF1Q9Y548 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YIPF1Q9Y548 PKD1P1-201ENST00000458669 6805 ntBASIC17.09■□□□□ 0.33
YIPF1Q9Y548 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
YIPF1Q9Y548 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.08■□□□□ 0.32
YIPF1Q9Y548 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 AL139010.1-201ENST00000454878 894 ntBASIC17.08■□□□□ 0.32
YIPF1Q9Y548 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms