Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 IGHV3-72-202ENST00000621503 303 ntBASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS5Q9UPZ3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 AL133338.1-201ENST00000565695 1517 ntBASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 AC005052.1-201ENST00000625181 2492 ntBASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 TSSK5P-201ENST00000423978 907 ntBASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 MIR4525-201ENST00000580000 75 ntBASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 MIR4515-201ENST00000584082 81 ntBASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 AC100757.3-201ENST00000622361 1406 ntBASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS5Q9UPZ3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AC004945.1-201ENST00000416738 983 ntBASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 KRT8P23-201ENST00000560090 1207 ntBASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AC022144.1-201ENST00000602255 1580 ntBASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AL590560.3-201ENST00000623350 461 ntBASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 GGT3P-204ENST00000453783 1664 ntBASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 AC012569.1-201ENST00000591191 1524 ntBASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS5Q9UPZ3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.54■□□□□ 0.72
HPS5Q9UPZ3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.54■□□□□ 0.72
HPS5Q9UPZ3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS5Q9UPZ3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms