Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 AC016027.1-202ENST00000607927 1699 ntBASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 MIR346-201ENST00000362234 95 ntBASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 UGT1A2P-201ENST00000454886 866 ntBASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 MIR3909-201ENST00000579518 119 ntBASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 MIR6080-201ENST00000617359 66 ntBASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 AP001350.2-201ENST00000625104 1094 ntBASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC6Q9UBN7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 MIR661-201ENST00000384842 89 ntBASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 AC236430.1-201ENST00000402231 743 ntBASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 TSPY16P-201ENST00000449843 468 ntBASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 AL138918.1-201ENST00000568306 659 ntBASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 AC239800.4-201ENST00000603712 296 ntBASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HDAC6Q9UBN7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms