Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AC112907.2-201ENST00000448639 330 ntBASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AC011840.4-201ENST00000578471 627 ntBASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 TMEM191A-211ENST00000637163 1067 ntBASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SND1-IT1Q9HBX3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 KRT18P38-201ENST00000449496 1282 ntBASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AC002310.6-201ENST00000624451 1377 ntBASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AL021920.2-201ENST00000624828 1351 ntBASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 ST20-AS1-201ENST00000560255 4223 ntBASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms