Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 EMBP1-201ENST00000458200 901 ntBASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 AC108073.2-201ENST00000464002 357 ntBASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 AF186996.4-201ENST00000467186 377 ntBASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 AC012640.2-201ENST00000561606 901 ntBASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 AL121912.1-201ENST00000603683 238 ntBASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRTM1Q9HBL6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 RPS2P28-201ENST00000314255 741 ntBASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 KRT18P67-201ENST00000432816 1264 ntBASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 OR7E47P-204ENST00000575924 449 ntBASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 AC004790.2-201ENST00000623588 572 ntBASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRTM1Q9HBL6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 AC105917.1-201ENST00000506637 2539 ntBASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRTM1Q9HBL6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms