Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 TUBB8P12-201ENST00000308911 1335 ntBASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 TUBB7P-202ENST00000428444 1305 ntBASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 TUBB8P7-204ENST00000567960 1332 ntBASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 DBET-201ENST00000630918 3363 ntBASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 AC092364.2-201ENST00000596710 2692 ntBASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 AC004790.2-201ENST00000623588 572 ntBASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 NFIC-211ENST00000641145 8399 ntBASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 AC104109.2-201ENST00000602919 1418 ntBASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CLK4Q9HAZ1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 AC099063.4-201ENST00000641099 1602 ntBASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 AC027601.4-201ENST00000611259 610 ntBASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 FAM197Y3-203ENST00000618346 717 ntBASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 AC126177.1-201ENST00000547829 2218 ntBASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CLK4Q9HAZ1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms