Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
BRF2Q9HAW0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 AC092919.2-201ENST00000623631 1645 ntBASIC15.76■□□□□ 0.11
BRF2Q9HAW0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 KRT18P34-201ENST00000488218 1270 ntBASIC15.76■□□□□ 0.11
BRF2Q9HAW0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.76■□□□□ 0.11
BRF2Q9HAW0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AC024909.3-201ENST00000611513 2257 ntBASIC15.75■□□□□ 0.11
BRF2Q9HAW0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 BCAR1-209ENST00000546196 1340 ntBASIC15.75■□□□□ 0.11
BRF2Q9HAW0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AC093724.1-201ENST00000448659 1027 ntBASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 RPL13AP23-201ENST00000480739 586 ntBASIC15.75■□□□□ 0.11
BRF2Q9HAW0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AL078644.1-201ENST00000609881 752 ntBASIC15.75■□□□□ 0.11
BRF2Q9HAW0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AC004877.2-201ENST00000623941 599 ntBASIC15.75■□□□□ 0.11
BRF2Q9HAW0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms