Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS2Q99743 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPAS2Q99743 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS2Q99743 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NPAS2Q99743 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NPAS2Q99743 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NPAS2Q99743 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS2Q99743 AC098831.1-202ENST00000438821 336 ntBASIC16.21■□□□□ 0.19
NPAS2Q99743 PRYP5-201ENST00000451909 266 ntBASIC16.21■□□□□ 0.19
NPAS2Q99743 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.21■□□□□ 0.19
NPAS2Q99743 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS2Q99743 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.21■□□□□ 0.19
NPAS2Q99743 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NPAS2Q99743 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPAS2Q99743 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NPAS2Q99743 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NPAS2Q99743 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NPAS2Q99743 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS2Q99743 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS2Q99743 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPAS2Q99743 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.21■□□□□ 0.18
NPAS2Q99743 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS2Q99743 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS2Q99743 AC104640.1-201ENST00000562617 2109 ntBASIC16.21■□□□□ 0.18
NPAS2Q99743 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS2Q99743 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.21■□□□□ 0.18
NPAS2Q99743 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
NPAS2Q99743 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPAS2Q99743 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS2Q99743 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS2Q99743 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.2■□□□□ 0.18
NPAS2Q99743 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.2■□□□□ 0.18
NPAS2Q99743 AL603832.2-201ENST00000566195 2125 ntBASIC16.2■□□□□ 0.18
NPAS2Q99743 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.2■□□□□ 0.18
NPAS2Q99743 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS2Q99743 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NPAS2Q99743 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS2Q99743 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS2Q99743 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NPAS2Q99743 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS2Q99743 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPAS2Q99743 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NPAS2Q99743 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS2Q99743 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS2Q99743 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.19■□□□□ 0.18
NPAS2Q99743 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.19■□□□□ 0.18
NPAS2Q99743 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NPAS2Q99743 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS2Q99743 LAGE3P1-201ENST00000425356 484 ntBASIC16.19■□□□□ 0.18
NPAS2Q99743 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS2Q99743 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS2Q99743 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS2Q99743 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS2Q99743 AC105339.3-201ENST00000560043 636 ntBASIC16.19■□□□□ 0.18
NPAS2Q99743 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.19■□□□□ 0.18
NPAS2Q99743 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms