Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ELL2P1-201ENST00000413990 1906 ntBASIC13.82□□□□□ -0.2
CCL13Q99616 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL13Q99616 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL13Q99616 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL13Q99616 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.82□□□□□ -0.2
CCL13Q99616 TFAMP1-201ENST00000412727 736 ntBASIC13.82□□□□□ -0.2
CCL13Q99616 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 ACTG1P14-201ENST00000446382 1122 ntBASIC13.82□□□□□ -0.2
CCL13Q99616 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
CCL13Q99616 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL13Q99616 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.82□□□□□ -0.2
CCL13Q99616 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.82□□□□□ -0.2
CCL13Q99616 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.82□□□□□ -0.2
CCL13Q99616 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCL13Q99616 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
CCL13Q99616 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.82□□□□□ -0.2
CCL13Q99616 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL13Q99616 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 FLJ16779-201ENST00000612722 7638 ntBASIC13.81□□□□□ -0.2
CCL13Q99616 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL13Q99616 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL13Q99616 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 TIMM8BP1-201ENST00000452384 211 ntBASIC13.81□□□□□ -0.2
CCL13Q99616 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 FAM86C2P-203ENST00000528684 1004 ntBASIC13.81□□□□□ -0.2
CCL13Q99616 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL13Q99616 AL135744.1-201ENST00000565098 629 ntBASIC13.81□□□□□ -0.2
CCL13Q99616 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL13Q99616 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCL13Q99616 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL13Q99616 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 AL662844.4-201ENST00000606367 2838 ntBASIC13.81□□□□□ -0.2
CCL13Q99616 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL13Q99616 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CCL13Q99616 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms