Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 ANKRD19P-201ENST00000338192 862 ntBASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.91■□□□□ 0.78
CRAMP1Q96RY5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 AC104989.1-201ENST00000519711 778 ntBASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRAMP1Q96RY5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
CRAMP1Q96RY5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 AC060834.1-201ENST00000443027 2032 ntBASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 EEF1DP4-201ENST00000446006 880 ntBASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 REXO1L6P-201ENST00000603433 1515 ntBASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 LINC01115-203ENST00000606068 577 ntBASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CRAMP1Q96RY5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 GGT3P-204ENST00000453783 1664 ntBASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.88■□□□□ 0.77
CRAMP1Q96RY5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms