Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX11Q96FC9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX11Q96FC9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 AC092919.2-201ENST00000623631 1645 ntBASIC19.59■□□□□ 0.73
DDX11Q96FC9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 AC107918.2-201ENST00000530817 355 ntBASIC19.59■□□□□ 0.73
DDX11Q96FC9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 AL513210.1-201ENST00000629608 234 ntBASIC19.59■□□□□ 0.73
DDX11Q96FC9 AC105339.1-204ENST00000636249 355 ntBASIC19.59■□□□□ 0.73
DDX11Q96FC9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX11Q96FC9 SLC22A20-204ENST00000530038 1673 ntBASIC19.59■□□□□ 0.73
DDX11Q96FC9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DDX11Q96FC9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX11Q96FC9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX11Q96FC9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX11Q96FC9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DDX11Q96FC9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
DDX11Q96FC9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
DDX11Q96FC9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX11Q96FC9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.58■□□□□ 0.73
DDX11Q96FC9 AC004461.1-201ENST00000412461 403 ntBASIC19.58■□□□□ 0.72
DDX11Q96FC9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 MIR4492-201ENST00000581627 80 ntBASIC19.58■□□□□ 0.72
DDX11Q96FC9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 AC093028.1-201ENST00000622998 982 ntBASIC19.58■□□□□ 0.72
DDX11Q96FC9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX11Q96FC9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX11Q96FC9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.57■□□□□ 0.72
DDX11Q96FC9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms