Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S1Q92572 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
AP3S1Q92572 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
AP3S1Q92572 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S1Q92572 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
AP3S1Q92572 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.58□□□□□ -0.08
AP3S1Q92572 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
AP3S1Q92572 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.58□□□□□ -0.08
AP3S1Q92572 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.58□□□□□ -0.08
AP3S1Q92572 GCSHP2-201ENST00000560971 527 ntBASIC14.58□□□□□ -0.08
AP3S1Q92572 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.58□□□□□ -0.08
AP3S1Q92572 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.58□□□□□ -0.08
AP3S1Q92572 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S1Q92572 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AP3S1Q92572 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AP3S1Q92572 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 AC020658.6-201ENST00000623564 1870 ntBASIC14.57□□□□□ -0.08
AP3S1Q92572 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 AP002414.1-201ENST00000391405 1147 ntBASIC14.57□□□□□ -0.08
AP3S1Q92572 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 MIR1238-201ENST00000408483 83 ntBASIC14.57□□□□□ -0.08
AP3S1Q92572 ECEL1P3-201ENST00000427961 737 ntBASIC14.57□□□□□ -0.08
AP3S1Q92572 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.57□□□□□ -0.08
AP3S1Q92572 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.57□□□□□ -0.08
AP3S1Q92572 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.57□□□□□ -0.08
AP3S1Q92572 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AP3S1Q92572 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.57□□□□□ -0.08
AP3S1Q92572 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S1Q92572 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.57□□□□□ -0.08
AP3S1Q92572 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S1Q92572 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.56□□□□□ -0.08
AP3S1Q92572 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AP3S1Q92572 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
AP3S1Q92572 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 AL031731.1-201ENST00000642131 2094 ntBASIC14.56□□□□□ -0.08
AP3S1Q92572 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.56□□□□□ -0.08
AP3S1Q92572 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.56□□□□□ -0.08
AP3S1Q92572 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.56□□□□□ -0.08
AP3S1Q92572 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.56□□□□□ -0.08
AP3S1Q92572 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.56□□□□□ -0.08
AP3S1Q92572 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms