Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 AC148477.5-201ENST00000625164 1645 ntBASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 MIR718-201ENST00000390190 70 ntBASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 KRT17P2-201ENST00000300992 1314 ntBASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 AC005089.1-201ENST00000619486 2241 ntBASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM4Q8WVI0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 AL845331.1-201ENST00000424978 1190 ntBASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 AC009533.2-201ENST00000543664 586 ntBASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 MIR4492-201ENST00000581627 80 ntBASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 AL590326.2-201ENST00000625139 305 ntBASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM4Q8WVI0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 MMP23A-201ENST00000234610 1017 ntBASIC14.11□□□□□ -0.15
SMIM4Q8WVI0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms