Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC135050.7-201ENST00000624508 2218 ntBASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRUNE2Q8WUY3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PRUNE2Q8WUY3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 KRT18P55-202ENST00000578578 1546 ntBASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 INTS4P2-202ENST00000614726 2019 ntBASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 IQSEC3P1-201ENST00000538799 536 ntBASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 RHOXF1P1-202ENST00000635473 501 ntBASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
PRUNE2Q8WUY3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AC016700.1-201ENST00000429424 312 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 SPTLC1P5-201ENST00000450718 252 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 RN7SL574P-201ENST00000581512 297 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AL139011.1-202ENST00000642063 584 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AC124283.3-201ENST00000570869 594 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 CLUHP6-201ENST00000580789 941 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AHCYP2-201ENST00000430630 1300 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AC079328.2-201ENST00000561241 3354 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AL049840.4-201ENST00000602422 811 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 AC244452.3-201ENST00000636814 210 ntBASIC16.88■□□□□ 0.29
PRUNE2Q8WUY3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.87■□□□□ 0.29
PRUNE2Q8WUY3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRUNE2Q8WUY3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRUNE2Q8WUY3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRUNE2Q8WUY3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRUNE2Q8WUY3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.87■□□□□ 0.29
PRUNE2Q8WUY3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms