Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH20Q8N6Y1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 AL592309.1-201ENST00000443127 649 ntBASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 KRT18P34-201ENST00000488218 1270 ntBASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 AC027612.4-201ENST00000605371 583 ntBASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH20Q8N6Y1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 SPCS2P4-201ENST00000436160 681 ntBASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 KRT8P23-201ENST00000560090 1207 ntBASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 AL603756.1-201ENST00000606511 2163 ntBASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms