Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 AC106886.4-201ENST00000623557 2502 ntBASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 AC011467.4-201ENST00000594891 528 ntBASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCN4BQ8IWT1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 HLA-H-201ENST00000383620 1096 ntBASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 AC093214.1-201ENST00000511688 1107 ntBASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 AC018529.1-201ENST00000613063 361 ntBASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 HLA-A-202ENST00000376806 1854 ntBASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCN4BQ8IWT1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SCN4BQ8IWT1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms