Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LDB1Q86U70 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LDB1Q86U70 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.48■□□□□ 0.23
LDB1Q86U70 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.48■□□□□ 0.23
LDB1Q86U70 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.48■□□□□ 0.23
LDB1Q86U70 AC106730.1-201ENST00000566722 1090 ntBASIC16.48■□□□□ 0.23
LDB1Q86U70 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.48■□□□□ 0.23
LDB1Q86U70 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.48■□□□□ 0.23
LDB1Q86U70 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 AC140113.2-201ENST00000604370 208 ntBASIC16.48■□□□□ 0.23
LDB1Q86U70 AC007064.4-201ENST00000637740 555 ntBASIC16.48■□□□□ 0.23
LDB1Q86U70 AC092865.6-201ENST00000642101 219 ntBASIC16.48■□□□□ 0.23
LDB1Q86U70 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LDB1Q86U70 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.48■□□□□ 0.23
LDB1Q86U70 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LDB1Q86U70 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 AL596087.1-201ENST00000400979 1969 ntBASIC16.47■□□□□ 0.23
LDB1Q86U70 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LDB1Q86U70 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB1Q86U70 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.47■□□□□ 0.23
LDB1Q86U70 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB1Q86U70 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LDB1Q86U70 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 MIR940-201ENST00000401276 94 ntBASIC16.47■□□□□ 0.23
LDB1Q86U70 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB1Q86U70 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.47■□□□□ 0.23
LDB1Q86U70 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.47■□□□□ 0.23
LDB1Q86U70 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
LDB1Q86U70 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.47■□□□□ 0.23
LDB1Q86U70 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 PAUPAR-201ENST00000630360 2965 ntBASIC16.47■□□□□ 0.23
LDB1Q86U70 CICP6-201ENST00000457191 2729 ntBASIC16.47■□□□□ 0.23
LDB1Q86U70 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 LINC01144-201ENST00000626198 1710 ntBASIC16.47■□□□□ 0.23
LDB1Q86U70 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LDB1Q86U70 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LDB1Q86U70 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.47■□□□□ 0.23
LDB1Q86U70 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LDB1Q86U70 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
LDB1Q86U70 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LDB1Q86U70 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.46■□□□□ 0.23
LDB1Q86U70 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.46■□□□□ 0.23
LDB1Q86U70 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.46■□□□□ 0.23
LDB1Q86U70 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms