Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 AC005052.1-201ENST00000625181 2492 ntBASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 PMS2P4-201ENST00000412466 1052 ntBASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 FDX1P1-201ENST00000449115 551 ntBASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 AL513480.1-201ENST00000451731 511 ntBASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 AC021097.1-201ENST00000607902 574 ntBASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST2H3AQ71DI3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST2H3AQ71DI3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 AC034105.1-201ENST00000563488 319 ntBASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 AC010507.1-201ENST00000633895 436 ntBASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST2H3AQ71DI3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIST2H3AQ71DI3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms