Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 FAM86C2P-203ENST00000528684 1004 ntBASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 AC016027.1-202ENST00000607927 1699 ntBASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 AC079140.1-201ENST00000508039 487 ntBASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 AC007950.2-201ENST00000615045 2347 ntBASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD3Q6PCD5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFWD3Q6PCD5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFWD3Q6PCD5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RFWD3Q6PCD5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms