Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AL513523.2-202ENST00000427283 2040 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC39BQ5VTQ0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 AL671277.1-201ENST00000429656 993 ntBASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 WASH6P-202ENST00000359512 1437 ntBASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 KRT8P39-201ENST00000396270 1433 ntBASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC39BQ5VTQ0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 AL162727.3-201ENST00000635661 2787 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms