Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 AL078644.1-201ENST00000609881 752 ntBASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CROCCP1-201ENST00000426910 5675 ntBASIC17.09■□□□□ 0.33
LRRC38Q5VT99 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 CICP6-201ENST00000457191 2729 ntBASIC17.09■□□□□ 0.33
LRRC38Q5VT99 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC38Q5VT99 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC38Q5VT99 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LRRC38Q5VT99 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC38Q5VT99 AP005117.1-202ENST00000581724 1908 ntBASIC17.08■□□□□ 0.33
LRRC38Q5VT99 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 AC008677.1-201ENST00000519230 1561 ntBASIC17.08■□□□□ 0.32
LRRC38Q5VT99 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 AC034105.1-201ENST00000563488 319 ntBASIC17.08■□□□□ 0.32
LRRC38Q5VT99 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.08■□□□□ 0.32
LRRC38Q5VT99 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC38Q5VT99 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms