Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CERKLQ49MI3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CERKLQ49MI3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 AC005225.4-201ENST00000557330 545 ntBASIC19.17■□□□□ 0.66
CERKLQ49MI3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CERKLQ49MI3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.17■□□□□ 0.66
CERKLQ49MI3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 HLA-A-202ENST00000376806 1854 ntBASIC19.16■□□□□ 0.66
CERKLQ49MI3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 AC005034.1-201ENST00000426657 489 ntBASIC19.16■□□□□ 0.66
CERKLQ49MI3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 AP005018.1-201ENST00000525475 301 ntBASIC19.16■□□□□ 0.66
CERKLQ49MI3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 AC012645.4-201ENST00000610691 1061 ntBASIC19.16■□□□□ 0.66
CERKLQ49MI3 AL035252.4-201ENST00000624174 288 ntBASIC19.16■□□□□ 0.66
CERKLQ49MI3 AC004840.1-201ENST00000636359 365 ntBASIC19.16■□□□□ 0.66
CERKLQ49MI3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CERKLQ49MI3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CERKLQ49MI3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CERKLQ49MI3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.15■□□□□ 0.66
CERKLQ49MI3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CERKLQ49MI3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.15■□□□□ 0.66
CERKLQ49MI3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms