Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 AC093724.1-201ENST00000448659 1027 ntBASIC17.11■□□□□ 0.33
EFEMP1Q12805 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 RARRES2P9-201ENST00000565168 469 ntBASIC17.11■□□□□ 0.33
EFEMP1Q12805 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.1■□□□□ 0.33
EFEMP1Q12805 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SPDYE7P-202ENST00000420373 878 ntBASIC17.1■□□□□ 0.33
EFEMP1Q12805 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 TUBB3P1-201ENST00000405796 1332 ntBASIC17.1■□□□□ 0.33
EFEMP1Q12805 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 NKILA-202ENST00000614771 2598 ntBASIC17.1■□□□□ 0.33
EFEMP1Q12805 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
EFEMP1Q12805 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFEMP1Q12805 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 HLA-H-201ENST00000383620 1096 ntBASIC17.09■□□□□ 0.33
EFEMP1Q12805 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 AC098859.1-201ENST00000502915 1238 ntBASIC17.09■□□□□ 0.33
EFEMP1Q12805 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 LINC01144-201ENST00000626198 1710 ntBASIC17.09■□□□□ 0.33
EFEMP1Q12805 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFEMP1Q12805 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EFEMP1Q12805 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFEMP1Q12805 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
EFEMP1Q12805 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFEMP1Q12805 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFEMP1Q12805 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFEMP1Q12805 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms