Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC3P51654 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GPC3P51654 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GPC3P51654 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GPC3P51654 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
GPC3P51654 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.17■□□□□ 0.5
GPC3P51654 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 HLA-J-202ENST00000469281 1241 ntBASIC18.17■□□□□ 0.5
GPC3P51654 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.17■□□□□ 0.5
GPC3P51654 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.17■□□□□ 0.5
GPC3P51654 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.17■□□□□ 0.5
GPC3P51654 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC3P51654 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC3P51654 AL158211.3-201ENST00000607385 239 ntBASIC18.17■□□□□ 0.5
GPC3P51654 AC018529.1-201ENST00000613063 361 ntBASIC18.17■□□□□ 0.5
GPC3P51654 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GPC3P51654 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC3P51654 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC3P51654 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC3P51654 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC3P51654 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
GPC3P51654 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 AC092171.3-201ENST00000610122 2651 ntBASIC18.16■□□□□ 0.5
GPC3P51654 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC3P51654 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 PCDHA14-201ENST00000506751 2298 ntBASIC18.16■□□□□ 0.5
GPC3P51654 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 AC006538.1-201ENST00000567905 1585 ntBASIC18.16■□□□□ 0.5
GPC3P51654 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC3P51654 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC3P51654 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
GPC3P51654 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC3P51654 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.15■□□□□ 0.5
GPC3P51654 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
GPC3P51654 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GPC3P51654 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GPC3P51654 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.15■□□□□ 0.5
GPC3P51654 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC3P51654 RNA5SP421-201ENST00000516864 134 ntBASIC18.15■□□□□ 0.5
GPC3P51654 AC069120.2-201ENST00000524091 540 ntBASIC18.15■□□□□ 0.5
GPC3P51654 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.15■□□□□ 0.5
GPC3P51654 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.15■□□□□ 0.5
GPC3P51654 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC3P51654 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC3P51654 SPTSSB-204ENST00000617024 1292 ntBASIC18.15■□□□□ 0.5
GPC3P51654 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC3P51654 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
GPC3P51654 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC3P51654 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms